Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802432.1_cds_XP_016479425.1_7055
CDS Infomation

[gene=LOC107800712] [db_xref=GeneID:107800712] [protein=serine/threonine-protein kinase CDL1-like] [protein_id=XP_016479425.1] [location=join(23083..23170,23390..23425,23548..23732,25055..25244,25881..26269,26546..26854)] [gbkey=CDS]
Sequence

ATGAGTTGCTTTTCTTGCATGAGCCCTCGTCCTAAGAATGTTAGAGAATATGATGAAGAC
ATGGTCCCACGATCCAACAGTTCTGCAGTGCACGCGAGGGGGGAATCTAGTGATTCTGGA
AGTGGAAATGGGAGAAAGGAAGGTTCTTCGAAAGGTAAAAGTAGGGAAAGTAACAATCAG
AACAGCGATGTCGCTCGCAGTTTCACATTCAAGGAACTAGCCACAGCAACTCAGAATTTT
AAGGAAACTAATCTTATTGGAGAAGGTGGTTTTGGATGTGTCTACAAAGGCCGCCTCGAT
TCTGGCCTGATTGTCGCAATCAAACAACTTAATCTCGAAGGCCTTCAAGGGAACCAAGAA
TTTATTGTGGAGGTCCTGATGTTGAGTTTACTACATCATAAAAATCTTGTCAACCTGATT
GGATACTGCACTCATGGAGATCAGAGGCTTTTGGTTTACGAGTTCATGCCAATGGGTAGC
TTGGAAAATCATCTTTTTGATTTAGAACCAGGAACGGAGCCACTGAGTTGGAGAACAAGA
CTAAAGATTGCCGCAGGCGCAGCTCATGGACTTGAGTATCTACACAAAGCAAATCCGCCC
GTCATTTACCGTGATTTGAAATCTTCAAATATCTTGTTGGACAATGAATTCAATCCAAAG
CTGTCAGATTTTGGACTTGCAAAGCTCGGACCTGTAGGTGACAACACTCATGTTTCAACA
AGAGTGATGGGAACCTATGGATATTGTGCCCCTGAGTATGCGATGACCGGAAAGTTGACT
TTGAAATCTGACATCTATAGCATGGGTGTTGTTCTATTGGAGCTAATAACGGGGCGAAAG
GCTTATGATACCTCTAAGAAACCTGGAGAACAGAACCTTGTTGTTTGGTCTAGTCCTTTC
CTCAAGGACCGGAGGAAGTATGTTCATATGGTTGACCCGTCGTTGCATGGTCAGTTCTCT
GCTCGCTGTTTGCACCATGCAGTTGCTATTACTGCAATGTGTCTTCAGGAACAAGCCAAT
TTTCGCCCCATGATCAGCGATATTGTTACAGCCCTTGACTATCTTGTCGCTCAAGCACAA
AGCTCGGGTCCACATAGAGGTGGTTCACACACTGGCAAGAAAACATCTCCATCAGAAGAA
GAGTTTAATGGCAATACAAGAAAGCGAAGTTTTGAAAACATCTCTGTTACATTTTAA

Peptide Sequence

PEP ID

XP_016479425.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase CDL1-like [Nicotiana tabacum]
Sequence

MSCFSCMSPRPKNVREYDEDMVPRSNSSAVHARGESSDSGSGNGRKEGSSKGKSRESNNQ
NSDVARSFTFKELATATQNFKETNLIGEGGFGCVYKGRLDSGLIVAIKQLNLEGLQGNQE
FIVEVLMLSLLHHKNLVNLIGYCTHGDQRLLVYEFMPMGSLENHLFDLEPGTEPLSWRTR
LKIAAGAAHGLEYLHKANPPVIYRDLKSSNILLDNEFNPKLSDFGLAKLGPVGDNTHVST
RVMGTYGYCAPEYAMTGKLTLKSDIYSMGVVLLELITGRKAYDTSKKPGEQNLVVWSSPF
LKDRRKYVHMVDPSLHGQFSARCLHHAVAITAMCLQEQANFRPMISDIVTALDYLVAQAQ
SSGPHRGGSHTGKKTSPSEEEFNGNTRKRSFENISVTF

Transcript Sequence

Gene sequence data has not been registered.